ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8aykB1 - ECOD Domain | ECOD

ECOD/Domains/e8aykB1

e8aykB1

UID: 002982456

PDB

Range: B:1-115
PDB: 8AYK chain B(all domains)

Molecule: Aminotransferase class IV

3D Structure

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Related Domains

Browse other domains in Aminotran_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020)

HH-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020.1)

TT-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020.1.1)

FFamilyAminotran_4(4020.1.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxamine-5'-PhosphatePMP
drugDrugBank DB02142
(~{Z})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]pent-2-enedioic acidPW0

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01063Aminotran_4

Amino-transferase class IV

External Links

ECOD PDB View: 8AYK RCSB PDB: 8AYK PDBe: 8AYK

Downloads

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