ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8aypC1 - ECOD Domain | ECOD

ECOD/Domains/e8aypC1

e8aypC1

UID: 002982459

PDB

Range: C:21-113
PDB: 8AYP chain C(all domains)

Molecule: Potassium channel protein

3D Structure

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Related Domains

Browse other domains in Ion_trans_2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans_2(5054.1.1.8)

Ligands

in contact, ≤ 4 Å

Rubidium ionRB
metal
Barium ionBA
metalwithin 5 Å only

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

Pfam Families

PF07885Ion_trans_2

Ion channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 8AYP RCSB PDB: 8AYP PDBe: 8AYP

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4r)-2-Methylpentane-2,4-Diol

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.