ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bluD1 - ECOD Domain | ECOD

ECOD/Domains/e8bluD1

e8bluD1

UID: 002984007

PDB

Range: D:195-298
PDB: 8BLU chain D(all domains)

Molecule: Syntenin-1

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

AlanineALA
drugDrugBank DB00160
D-Glutamic AcidDGL
drugDrugBank DB02517

+ 3 additives (Glycerin, Sulfate ion, 1,2-ETHANEDIOL)

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 8BLU RCSB PDB: 8BLU PDBe: 8BLU

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.