ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bp2DDD1 - ECOD Domain | ECOD

ECOD/Domains/e8bp2DDD1

e8bp2DDD1

UID: 002984023

PDB

Range: DDD:417-639
PDB: 8BP2 chain DDD(all domains)

Molecule: DNA gyrase subunit B

3D Structure

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Related Domains

Browse other domains in DNA_gyraseB_C,Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyDNA_gyraseB_C,Toprim(2006.1.3.1)

Ligands

in contact, ≤ 4 Å

ZoliflodacinR8U
drugDrugBank DB12817
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00986DNA_gyraseB_C

DNA gyrase B subunit, carboxyl terminus

Toprim domain

ClanCL0413Toprim-like

External Links

ECOD PDB View: 8BP2 RCSB PDB: 8BP2 PDBe: 8BP2

Downloads

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