ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bpxM1 - ECOD Domain | ECOD

ECOD/Domains/e8bpxM1

e8bpxM1

UID: 002984059

PDB

Range: M:2-495
PDB: 8BPX chain M(all domains)

Molecule: NADH-ubiquinone oxidoreductase chain 4

3D Structure

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Related Domains

Browse other domains in Proton_antipo_M →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium/proton antiporter subunits-like(3281)

HH-groupSodium/proton antiporter subunits-like(3281.1)

TT-groupNADH-quinone oxidoreductase subunit L (NuoL)-related(3281.1.1)

FFamilyProton_antipo_M(3281.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE3PH
(7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDEPC7
(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATEPGT

Pfam Families

PF00361Proton_antipo_M

NADH:quinone oxidoreductase/Mrp antiporter, TM

ClanCL0425ComplexI-N

External Links

ECOD PDB View: 8BPX RCSB PDB: 8BPX PDBe: 8BPX

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

PhosphatidylethanolaminePTY

2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosideQ7G

Shown in the structure viewer. Drug annotations from DrugDomain.