ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8bpxAC1 - ECOD Domain | ECOD

ECOD/Domains/e8bpxAC1

e8bpxAC1

UID: 002984081

PDB

Range: AC:2-267
PDB: 8BPX chain AC(all domains)

Molecule: Cytochrome b

3D Structure

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Related Domains

Browse other domains in Cytochrome_B, Cytochrom_B_N_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupTransmembrane di-heme cytochromes(5069.1.1)

FFamilyCytochrome_B, Cytochrom_B_N_2(5069.1.1.54)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
FerrohemeHEM
drugDrugBank DB18267
1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE

Pfam Families

PF00033Cytochrome_B

Cytochrome b/b6/petB

ClanCL03282heme_cytochrom

PF13631Cytochrom_B_N_2

Cytochrome b(N-terminal)/b6/petB

ClanCL03282heme_cytochrom

External Links

ECOD PDB View: 8BPX RCSB PDB: 8BPX PDBe: 8BPX

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDEPC7

(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATEPGT

2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONEUQ5

UBIQUINONE-7UQ7

FE2/S2 (INORGANIC) CLUSTERFES

within 5 Å only

PhosphatidylethanolaminePTY

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.