ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8d58A1 - ECOD Domain | ECOD

ECOD/Domains/e8d58A1

e8d58A1

UID: 002985886

PDB

Range: A:36-53,A:76-265
PDB: 8D58 chain A(all domains)

Molecule: tRNA (guanine-N(7)-)-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_4(2003.1.5.23)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Glycerin, Isopropyl alcohol)

GlycerinGOL
DrugBank DB09462
Isopropyl alcoholIPA

Pfam Families

PF02390Methyltransf_4

Putative methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8D58 RCSB PDB: 8D58 PDBe: 8D58

Downloads

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DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.