ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8dbdJ2 - ECOD Domain | ECOD

ECOD/Domains/e8dbdJ2

e8dbdJ2

UID: 002986601

PDB

Range: J:163-317
PDB: 8DBD chain J(all domains)

Molecule: Ribose-phosphate pyrophosphokinase 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pribosyltran, Pribosyl_synth →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPRTase-like(7573)

HH-groupPRTase-like(7573.1)

TT-groupPRTase-like(7573.1.1)

FFamilyPribosyltran, Pribosyl_synth(7573.1.1.9)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00156Pribosyltran

Phosphoribosyl transferase domain

ClanCL0533PRTase-like

PF14572Pribosyl_synth

Phosphoribosyl synthetase-associated domain

ClanCL0533PRTase-like

External Links

ECOD PDB View: 8DBD RCSB PDB: 8DBD PDBe: 8DBD

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure