ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8diqA2 - ECOD Domain | ECOD

ECOD/Domains/e8diqA2

e8diqA2

UID: 002987503

PDB

Range: A:245-437
PDB: 8DIQ chain A(all domains)

Molecule: Tubulin alpha-1B chain

3D Structure

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Related Domains

Browse other domains in Tubulin_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupTubulin C-terminal domain-like(301.6)

TT-groupTubulin C-terminal domain-like(301.6.1)

FFamilyTubulin_C(301.6.1.1)

Ligands

in contact, ≤ 4 Å

4-[2-(ethylamino)-6,7-dihydro-5H-cyclopenta[d]pyrimidin-4-yl]-7-methoxy-3,4-dihydroquinoxalin-2(1H)-oneJVI
within 5 Å only

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer.

Pfam Families

PF03953Tubulin_C

Tubulin C-terminal domain

ClanCL0442Tubulin_C

External Links

ECOD PDB View: 8DIQ RCSB PDB: 8DIQ PDBe: 8DIQ

Downloads

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Drug annotations from DrugDomain.