ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8f12A1 - ECOD Domain | ECOD

ECOD/Domains/e8f12A1

e8f12A1

UID: 002991693

PDB

Range: A:17-111
PDB: 8F12 chain A(all domains)

Molecule: E3 ubiquitin-protein ligase Mdm2

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-groupSWIB/MDM2 domain(178)

HH-groupSWIB/MDM2 domain(178.1)

TT-groupSWIB/MDM2 domain(178.1.1)

FFamilySWIB(178.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
N,N'-(1,4-phenylene)diacetamideWHL

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

SWIB/MDM2 domain

ClanCL0906SWIB

External Links

ECOD PDB View: 8F12 RCSB PDB: 8F12 PDBe: 8F12

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.