ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8f8yB2 - ECOD Domain | ECOD

ECOD/Domains/e8f8yB2

e8f8yB2

UID: 002992202

PDB

Range: B:0-64
PDB: 8F8Y chain B(all domains)

Molecule: Lysine-specific demethylase PHF2

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

PHD-finger

ClanCL0229RING

External Links

ECOD PDB View: 8F8Y RCSB PDB: 8F8Y PDBe: 8F8Y

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.