ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8g62A1 - ECOD Domain | ECOD

ECOD/Domains/e8g62A1

e8g62A1

UID: 002993916

PDB

Range: A:0-60
PDB: 8G62 chain A(all domains)

Molecule: Non-structural protein 3

3D Structure

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Related Domains

Browse other domains in CoV_peptidase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyCoV_peptidase(221.1.1.32)

Ligands

in contact, ≤ 4 Å

3-methoxy-5-(1-methylpiperidin-4-yl)-N-[4-(pyrrolidine-1-sulfonyl)phenyl]benzamideYOO

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08715CoV_peptidase

Coronavirus papain-like peptidase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 8G62 RCSB PDB: 8G62 PDBe: 8G62

Downloads

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