ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gvmZ1 - ECOD Domain | ECOD

ECOD/Domains/e8gvmZ1

e8gvmZ1

UID: 002994320

PDB

Range: Z:1-43
PDB: 8GVM chain Z(all domains)

Molecule: Cytochrome c oxidase subunit 8B, mitochondrial

3D Structure

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Related Domains

Browse other domains in COX8 →

Classification

AArchitectureextended segments(a.20)

XX-groupMitochondrial cytochrome c oxidase subunit VIIIb (aka IX)(5009)

HH-groupMitochondrial cytochrome c oxidase subunit VIIIb (aka IX)(5009.1)

TT-groupMitochondrial cytochrome c oxidase subunit VIIIb (aka IX)(5009.1.1)

FFamilyCOX8(5009.1.1.1)

Ligands

in contact, ≤ 4 Å

Decyl-beta-d-maltopyranosideDMU
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

Cytochrome oxidase c subunit VIII

External Links

ECOD PDB View: 8GVM RCSB PDB: 8GVM PDBe: 8GVM

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.