ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gxbC1 - ECOD Domain | ECOD

ECOD/Domains/e8gxbC1

e8gxbC1

UID: 002994458

PDB

Range: C:1-96
PDB: 8GXB chain C(all domains)

Molecule: U1 small nuclear ribonucleoprotein A

3D Structure

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Related Domains

Browse other domains in RRM_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 8GXB RCSB PDB: 8GXB PDBe: 8GXB

Downloads

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