ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8h0wC2 - ECOD Domain | ECOD

ECOD/Domains/e8h0wC2

e8h0wC2

UID: 002994863

PDB

Range: C:41-172
PDB: 8H0W chain C(all domains)

Molecule: RNA polymerase II third largest subunit B44, part of central core

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_A_bac →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupRibosomal protein TL5/L25 C-terminal domain-like(240)

HH-groupInsert subdomain of RNA polymerase alpha subunit(240.2)

TT-groupInsert subdomain of RNA polymerase alpha subunit(240.2.1)

FFamilyRNA_pol_A_bac(240.2.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01000RNA_pol_A_bac

RNA polymerase Rpb3/RpoA insert domain

External Links

ECOD PDB View: 8H0W RCSB PDB: 8H0W PDBe: 8H0W

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure