ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7qfmA1 - ECOD Domain | ECOD

ECOD/Domains/e7qfmA1

e7qfmA1

UID: 002997876

PDB

Range: A:33-305
PDB: 7QFM chain A(all domains)

Molecule: Serine/threonine-protein kinase pim-1

3D Structure

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Related Domains

Browse other domains in Pkinase, Kdo →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, Kdo(206.1.1.71)

Ligands

in contact, ≤ 4 Å

4-[(~{E})-(2-oxidanylidene-1~{H}-indol-3-ylidene)methyl]benzoic acidAY3

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

Lipopolysaccharide kinase (Kdo/WaaP) family

ClanCL0016PKinase

External Links

ECOD PDB View: 7QFM RCSB PDB: 7QFM PDBe: 7QFM

Downloads

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