ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7xd9A2 - ECOD Domain | ECOD

ECOD/Domains/e7xd9A2

e7xd9A2

UID: 003010837

PDB

Range: A:681-887
PDB: 7XD9 chain A(all domains)

Molecule: NS5

3D Structure

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Related Domains

Browse other domains in Flavi_NS5_thumb →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyFlavi_NS5_thumb(4967.1.1.14)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-TriphosphateCTP
drugDrugBank DB02431
Magnesium ionMG
metal
Zinc ionZN
metal

Shown in the structure viewer.

Pfam Families

PF20483Flavi_NS5_thumb

Flavivirus RNA-directed RNA polymerase, thumb domain

ClanCL0027RdRP

External Links

ECOD PDB View: 7XD9 RCSB PDB: 7XD9 PDBe: 7XD9

Downloads

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Drug annotations from DrugDomain.