ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7y4kA1 - ECOD Domain | ECOD

ECOD/Domains/e7y4kA1

e7y4kA1

UID: 003011849

PDB

Range: A:5-265
PDB: 7Y4K chain A(all domains)

Molecule: Ricin A chain

3D Structure

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Related Domains

Browse other domains in RIP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRIP/Polo-box domain(292)

HH-groupRibosome inactivating proteins (RIP)(292.1)

TT-groupRibosome inactivating proteins (RIP)(292.1.1)

FFamilyRIP(292.1.1.1)

Ligands

in contact, ≤ 4 Å

(2S)-2-[[(2S)-2-[2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]ethanoylamino]-3-phenyl-propanoyl]amino]-5-(phenylmethoxycarbonylamino)pentanoic acidJKU

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Ribosome inactivating protein

External Links

ECOD PDB View: 7Y4K RCSB PDB: 7Y4K PDBe: 7Y4K

Downloads

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Drug annotations from DrugDomain.