ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7yq7u1 - ECOD Domain | ECOD

ECOD/Domains/e7yq7u1

e7yq7u1

UID: 003015763

PDB

Range: u:8-104
PDB: 7YQ7 chain u(all domains)

Molecule: Photosystem II 12 kDa extrinsic protein

3D Structure

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Related Domains

Browse other domains in PsbU →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyPsbU(102.1.1.15)

Ligands

in contact, ≤ 4 Å

Heptyl 1-ThiohexopyranosideHTG
drugDrugBank DB04450

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer.

Pfam Families

Photosystem II 12 kDa extrinsic protein (PsbU)

ClanCL0198HHH

External Links

ECOD PDB View: 7YQ7 RCSB PDB: 7YQ7 PDBe: 7YQ7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.