ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ywzA1 - ECOD Domain | ECOD

ECOD/Domains/e7ywzA1

e7ywzA1

UID: 003016190

PDB

Range: A:409-677
PDB: 7YWZ chain A(all domains)

Molecule: Oligopeptidase B

3D Structure

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Related Domains

Browse other domains in Peptidase_S9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta-Hydrolases(7579)

HH-groupalpha/beta-Hydrolases(7579.1)

TT-groupalpha/beta-Hydrolases(7579.1.1)

FFamilyPeptidase_S9(7579.1.1.3)

Ligands

in contact, ≤ 4 Å

SpermineSPM
drugDrugBank DB00127

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00326Peptidase_S9

Prolyl oligopeptidase family

ClanCL0028AB_hydrolase

External Links

ECOD PDB View: 7YWZ RCSB PDB: 7YWZ PDBe: 7YWZ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.