ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8a4mA1 - ECOD Domain | ECOD

ECOD/Domains/e8a4mA1

e8a4mA1

UID: 003022934

PDB

Range: A:31-262
PDB: 8A4M chain A(all domains)

Molecule: Metallo-beta-lactamase VIM-2-like protein

3D Structure

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Related Domains

Browse other domains in Lactamase_B →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B(247.1.1.1)

Ligands

in contact, ≤ 4 Å

(2~{S})-2-[bis(1~{H}-imidazol-4-ylmethyl)amino]-5-(3-phenyl-5-sulfanylidene-1~{H}-1,2,4-triazol-4-yl)pentanoic acidL2R
Zinc ionZN
metal

+ 1 additive (Acetate)

Acetate

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 8A4M RCSB PDB: 8A4M PDBe: 8A4M

Downloads

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DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.