ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8aynA1 - ECOD Domain | ECOD

ECOD/Domains/e8aynA1

e8aynA1

UID: 003023548

PDB

Range: A:508-543,A:565-815
PDB: 8AYN chain A(all domains)

Molecule: Isoform Flip of Glutamate receptor 1

3D Structure

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Related Domains

Browse other domains in Lig_chan →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyLig_chan(5054.1.1.1)

Ligands

in contact, ≤ 4 Å

Palmitic AcidPLM
drugDrugBank DB03796
FanapanelZK1
drugDrugBank DB12393

Pfam Families

PF00060Lig_chan

Ligand-gated ion channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 8AYN RCSB PDB: 8AYN PDBe: 8AYN

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate

6-[(1~{S})-1-[1-[5-(2-hydroxyethyloxy)pyridin-2-yl]pyrazol-3-yl]ethyl]-3~{H}-1,3-benzothiazol-2-oneOLR

(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphatePOV

Shown in the structure viewer. Drug annotations from DrugDomain.