ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dhvA2 - ECOD Domain | ECOD

ECOD/Domains/e8dhvA2

e8dhvA2

UID: 003027445

PDB

Range: A:292-623
PDB: 8DHV chain A(all domains)

Molecule: Glycosyl hydrolase family 2, TIM barrel domain protein

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_2_C(2002.1.1.104)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives ((4S)-2-METHYL-2,4-PENTANEDIOL, Sulfate ion)

(4S)-2-METHYL-2,4-PENTANEDIOLMPD
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02836Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8DHV RCSB PDB: 8DHV PDBe: 8DHV

Downloads

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