ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8f4kl1 - ECOD Domain | ECOD

ECOD/Domains/e8f4kl1

e8f4kl1

UID: 003029375

PDB

Range: l:2-37
PDB: 8F4K chain l(all domains)

Molecule: Photosystem II reaction center protein L

3D Structure

Loading viewer...

Related Domains

Browse other domains in PsbL →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction center protein L, PsbL(5030)

HH-groupPhotosystem II reaction center protein L, PsbL(5030.1)

TT-groupPhotosystem II reaction center protein L, PsbL(5030.1.1)

FFamilyPsbL(5030.1.1.1)

Ligands

in contact, ≤ 4 Å

Chlorophyll ACLA
drugDrugBank DB02133
1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG
drugDrugBank DB02043

Pfam Families

PsbL protein

External Links

ECOD PDB View: 8F4K RCSB PDB: 8F4K PDBe: 8F4K

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Stearic acid

drugDrugBank DB03193

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONEPL9

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

Shown in the structure viewer. Drug annotations from DrugDomain.