ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8fwwB1 - ECOD Domain | ECOD

ECOD/Domains/e8fwwB1

e8fwwB1

UID: 003031011

PDB

Range: B:550-850
PDB: 8FWW chain B(all domains)

Molecule: Glutamate receptor ionotropic, kainate 2

3D Structure

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Related Domains

Browse other domains in Lig_chan →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyLig_chan(5054.1.1.1)

Ligands

in contact, ≤ 4 Å

Perampanel6ZP
drugDrugBank DB08883
N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Pfam Families

PF00060Lig_chan

Ligand-gated ion channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 8FWW RCSB PDB: 8FWW PDBe: 8FWW

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

4-cyclopropyl-7-fluoro-3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-dioxide2J9

Sodium ionNA

metal

(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphatePOV

Chloride ionCL

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.