ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8g43A1 - ECOD Domain | ECOD

ECOD/Domains/e8g43A1

e8g43A1

UID: 003031154

PDB

Range: A:1109-1207
PDB: 8G43 chain A(all domains)

Molecule: Histone deacetylase 6

3D Structure

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Related Domains

Browse other domains in zf-UBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal
3-{3-[2-(methylamino)-2-oxoethyl]-4-oxo-3,4-dihydroquinazolin-2-yl}propanoic acidZU6

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

ECOD PDB View: 8G43 RCSB PDB: 8G43 PDBe: 8G43

Downloads

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