ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gmnC1 - ECOD Domain | ECOD

ECOD/Domains/e8gmnC1

e8gmnC1

UID: 003032320

PDB

Range: C:365-367,C:387-392,C:421-684
PDB: 8GMN chain C(all domains)

Molecule: Complement C1s subcomponent

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

[4-(1-aminophthalazin-6-yl)piperazin-1-yl](2-methylphenyl)methanoneZWK

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 8GMN RCSB PDB: 8GMN PDBe: 8GMN

Downloads

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