ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7t1dB1 - ECOD Domain | ECOD

ECOD/Domains/e7t1dB1

e7t1dB1

UID: 003035848

PDB

Range: B:56-188,B:233-356
PDB: 7T1D chain B(all domains)

Molecule: NAD-dependent protein deacetylase sirtuin-2

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilySIR2(2003.1.4.5)

Ligands

in contact, ≤ 4 Å

7-(2,4-dimethyl-1H-imidazol-1-yl)-2-(5-{[4-(1H-pyrazol-1-yl)phenyl]methyl}-1,3-thiazol-2-yl)-1,2,3,4-tetrahydroisoquinolineE7K

+ 3 additives (Dimethyl sulfoxide, Sulfate ion, 1,2-ETHANEDIOL)

Dimethyl sulfoxideDMS
DrugBank DB01093
Sulfate ion

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7T1D RCSB PDB: 7T1D PDBe: 7T1D

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.