ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8docA1 - ECOD Domain | ECOD

ECOD/Domains/e8docA1

e8docA1

UID: 003041471

PDB

Range: A:1-533
PDB: 8DOC chain A(all domains)

Molecule: Retinoid isomerohydrolase

3D Structure

Loading viewer...

Related Domains

Browse other domains in RPE65 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRPE65(5.1.4.15)

Ligands

in contact, ≤ 4 Å

3-(cyclohexylamino)propanesulfonic acidCXS
drugDrugBank DB02219
Palmitic AcidPLM
drugDrugBank DB03796

Pfam Families

Retinal pigment epithelial membrane protein

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 8DOC RCSB PDB: 8DOC PDBe: 8DOC

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

FE (II) ION

metal

(1R)-1-[3-(cyclohexylmethoxy)phenyl]-3-(methylamino)propan-1-olSYL

Shown in the structure viewer. Drug annotations from DrugDomain.