ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8oovB1 - ECOD Domain | ECOD

ECOD/Domains/e8oovB1

e8oovB1

UID: 003056206

PDB

Range: B:-4-152
PDB: 8OOV chain B(all domains)

Molecule: Nucleoside diphosphate kinase A

3D Structure

Loading viewer...

Related Domains

Browse other domains in NDK →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNucleoside diphosphate kinases(304.34)

TT-groupNucleoside diphosphate kinases(304.34.1)

FFamilyNDK(304.34.1.1)

Ligands

in contact, ≤ 4 Å

3'-Phosphate-Adenosine-5'-DiphosphatePAP
drugDrugBank DB01842

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Nucleoside diphosphate kinase

External Links

ECOD PDB View: 8OOV RCSB PDB: 8OOV PDBe: 8OOV

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure