ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8d5vB1 - ECOD Domain | ECOD

ECOD/Domains/e8d5vB1

e8d5vB1

UID: 003056419

PDB

Range: B:453-549
PDB: 8D5V chain B(all domains)

Molecule: RNA polymerase sigma factor SigA,DNA-directed RNA polymerase subunit beta

3D Structure

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Related Domains

Browse other domains in Sigma70_r4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySigma70_r4(101.1.1.31)

Ligands

in contact, ≤ 4 Å

Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04545Sigma70_r4

Sigma-70, region 4

ClanCL0123HTH

External Links

ECOD PDB View: 8D5V RCSB PDB: 8D5V PDBe: 8D5V

Downloads

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