ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gsqC1 - ECOD Domain | ECOD

ECOD/Domains/e8gsqC1

e8gsqC1

UID: 003056527

PDB

Range: C:-1-153
PDB: 8GSQ chain C(all domains)

Molecule: Superoxide dismutase [Cu-Zn]

3D Structure

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Related Domains

Browse other domains in Sod_Cu →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCu,Zn superoxide dismutase-like(11.1.3)

FFamilySod_Cu(11.1.3.1)

Ligands

in contact, ≤ 4 Å

(9~{R})-3-[2-[4-(6-fluoranyl-1,2-benzoxazol-3-yl)piperidin-1-yl]ethyl]-2-methyl-9-oxidanyl-6,7,8,9-tetrahydropyrido[1,2-a]pyrimidin-4-oneK4I
Zinc ionZN
metal

+ 1 additive (Glycerin)

Glycerin

Pfam Families

Copper/zinc superoxide dismutase (SODC)

External Links

ECOD PDB View: 8GSQ RCSB PDB: 8GSQ PDBe: 8GSQ

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.