ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8b6sA2 - ECOD Domain | ECOD

ECOD/Domains/e8b6sA2

e8b6sA2

UID: 003059050

PDB

Range: A:3-237
PDB: 8B6S chain A(all domains)

Molecule: Green fluorescent protein,Haloalkane dehalogenase

3D Structure

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Related Domains

Browse other domains in GFP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Ligands

in contact, ≤ 4 Å

[9-[2-carboxy-5-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azaniumOEH

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

ECOD PDB View: 8B6S RCSB PDB: 8B6S PDBe: 8B6S

Downloads

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