ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8pdiA1 - ECOD Domain | ECOD

ECOD/Domains/e8pdiA1

e8pdiA1

UID: 003059340

PDB

Range: A:395-718
PDB: 8PDI chain A(all domains)

Molecule: Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

3D Structure

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Related Domains

Browse other domains in Exo_endo_phos2 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupDNase I-like(246.3)

TT-groupDNase I-like(246.3.1)

FFamilyExo_endo_phos2(246.3.1.4)

Ligands

in contact, ≤ 4 Å

(5-phenyl-1,3,4-thiadiazol-2-yl)methanimineYBZ

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22669Exo_endo_phos2

Endonuclease/Exonuclease/phosphatase family 2

ClanCL0530DNase_I-like

External Links

ECOD PDB View: 8PDI RCSB PDB: 8PDI PDBe: 8PDI

Downloads

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