ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8pdiA2 - ECOD Domain | ECOD

ECOD/Domains/e8pdiA2

e8pdiA2

UID: 003059341

PDB

Range: A:719-856
PDB: 8PDI chain A(all domains)

Molecule: Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

3D Structure

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Related Domains

Browse other domains in C2_SHIP1-2_2nd →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupC2 domain(11.2)

TT-groupC2 domain(11.2.1)

FFamilyC2_SHIP1-2_2nd(11.2.1.44)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF24147C2_SHIP1-2_2nd

SHIP1/2 second C2 domain

ClanCL0154C2

External Links

ECOD PDB View: 8PDI RCSB PDB: 8PDI PDBe: 8PDI

Downloads

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