ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8c5hS1 - ECOD Domain | ECOD

ECOD/Domains/e8c5hS1

e8c5hS1

UID: 003059436

PDB

Range: S:142-264
PDB: 8C5H chain S(all domains)

Molecule: Synaptotagmin-1

3D Structure

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Related Domains

Browse other domains in C2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupC2 domain(11.2)

TT-groupC2 domain(11.2.1)

FFamilyC2(11.2.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

C2 domain

ClanCL0154C2

External Links

ECOD PDB View: 8C5H RCSB PDB: 8C5H PDBe: 8C5H

Downloads

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