ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8ghrA1 - ECOD Domain | ECOD

ECOD/Domains/e8ghrA1

e8ghrA1

UID: 003059547

PDB

Range: A:614-921
PDB: 8GHR chain A(all domains)

Molecule: Ectonucleotide pyrophosphatase/phosphodiesterase family member 1, secreted form, Immunoglobulin gamma-1 heavy chain fusion

3D Structure

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Related Domains

Browse other domains in Endonuclease_NS →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHis-Me finger endonucleases(378)

HH-groupHis-Me finger endonucleases(378.1)

TT-groupHis-Me finger endonucleases(378.1.1)

FFamilyEndonuclease_NS(378.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01223Endonuclease_NS

DNA/RNA non-specific endonuclease

ClanCL0263His-Me_finger

External Links

ECOD PDB View: 8GHR RCSB PDB: 8GHR PDBe: 8GHR

Downloads

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