ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8am5f1 - ECOD Domain | ECOD

ECOD/Domains/e8am5f1

e8am5f1

UID: 003060428

PDB

Range: f:24-165
PDB: 8AM5 chain f(all domains)

Molecule: Photosystem I reaction center subunit III

3D Structure

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Related Domains

Browse other domains in PSI_PsaF →

Classification

AArchitectureextended segments(a.20)

XX-groupSubunit III of photosystem I reaction centre, PsaF(5019)

HH-groupSubunit III of photosystem I reaction centre, PsaF(5019.1)

TT-groupSubunit III of photosystem I reaction centre, PsaF(5019.1.1)

FFamilyPSI_PsaF(5019.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
1,2-Dipalmitoyl-Phosphatidyl-Glycerole

Pfam Families

PF02507PSI_PsaF

Photosystem I reaction centre subunit III

External Links

ECOD PDB View: 8AM5 RCSB PDB: 8AM5 PDBe: 8AM5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB02043

(1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-olZEX

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.