ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ybkB2 - ECOD Domain | ECOD

ECOD/Domains/e7ybkB2

e7ybkB2

UID: 003061617

PDB

Range: B:309-328,B:530-694
PDB: 7YBK chain B(all domains)

Molecule: Spike glycoprotein

3D Structure

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Related Domains

Browse other domains in CoV_S1_C →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupBeta domain of coronavirus spike glycoprotein(1043)

HH-groupBeta domain of coronavirus spike glycoprotein(1043.1)

TT-groupBeta domain of coronavirus spike glycoprotein(1043.1.1)

FFamilyCoV_S1_C(1043.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF19209CoV_S1_C

Coronavirus spike glycoprotein S1, C-terminal

External Links

ECOD PDB View: 7YBK RCSB PDB: 7YBK PDBe: 7YBK

Downloads

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