ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8ss2A1 - ECOD Domain | ECOD

ECOD/Domains/e8ss2A1

e8ss2A1

UID: 003062026

PDB

Range: A:827-1035
PDB: 8SS2 chain A(all domains)

Molecule: Glutamate receptor 2, Voltage-dependent calcium channel gamma-5 subunit chimera

3D Structure

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Related Domains

Browse other domains in Claudin_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupClaudin(633.23)

TT-groupClaudin(633.23.1)

FFamilyClaudin_2(633.23.1.4)

Ligands

in contact, ≤ 4 Å

CholesterolCLR
drugDrugBank DB04540
(Z,Z)-4-Hydroxy-N,N,N-Trimethyl-10-Oxo-7-[(1-Oxo-9-Octadecenyl)Oxy]-3,5,9-Trioxa-4-Phosphaheptacos-18-En-1-Aminium-4-OxidePCW
drug

Pfam Families

PF13903Claudin_2

PMP-22/EMP/MP20/Claudin tight junction

ClanCL0375Transporter

External Links

ECOD PDB View: 8SS2 RCSB PDB: 8SS2 PDBe: 8SS2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03690

DigitoninAJP

Shown in the structure viewer. Drug annotations from DrugDomain.