ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8ufmA2 - ECOD Domain | ECOD

ECOD/Domains/e8ufmA2

e8ufmA2

UID: 003064167

PDB

Range: A:541-671
PDB: 8UFM chain A(all domains)

Molecule: Papain-like protease nsp3

3D Structure

Loading viewer...

Related Domains

Browse other domains in bCoV_SUD_M →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMacro domain-like(7529)

HH-groupMacro domain-like(7529.1)

TT-groupMacro domain-like(7529.1.1)

FFamilybCoV_SUD_M(7529.1.1.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11633bCoV_SUD_M

Betacoronavirus single-stranded poly(A) binding domain

ClanCL0223MACRO

External Links

ECOD PDB View: 8UFM RCSB PDB: 8UFM PDBe: 8UFM

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure