ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8f5uC3 - ECOD Domain | ECOD

ECOD/Domains/e8f5uC3

e8f5uC3

UID: 003066289

PDB

Range: C:11-115,C:218-395
PDB: 8F5U chain C(all domains)

Molecule: Pyruvate kinase PKM

3D Structure

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Related Domains

Browse other domains in PK →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPK(2002.1.1.11)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal
Magnesium ionMG
metal

+ 2 additives (Tromethamine, Glycerin)

TromethamineTRS

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8F5U RCSB PDB: 8F5U PDBe: 8F5U

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

GlycerinGOL

DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.