ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7xvmD1 - ECOD Domain | ECOD

ECOD/Domains/e7xvmD1

e7xvmD1

UID: 003066626

PDB

Range: D:29-125
PDB: 7XVM chain D(all domains)

Molecule: Histone H2B type 1-J

3D Structure

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Related Domains

Browse other domains in Histone →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupHistone(148.1.1)

FFamilyHistone(148.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00125Histone

Core histone H2A/H2B/H3/H4 domain

ClanCL0012Histone

External Links

ECOD PDB View: 7XVM RCSB PDB: 7XVM PDBe: 7XVM

Downloads

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