ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8a29C2 - ECOD Domain | ECOD

ECOD/Domains/e8a29C2

e8a29C2

UID: 003066830

PDB

Range: C:33-217,C:241-293,C:295-318
PDB: 8A29 chain C(all domains)

Molecule: 1-deoxy-D-xylulose-5-phosphate synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in DXP_synthase_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyDXP_synthase_N(7574.1.1.11)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Magnesium ionMG
metal
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13292DXP_synthase_N

1-deoxy-D-xylulose-5-phosphate synthase

ClanCL0254THDP-binding

External Links

ECOD PDB View: 8A29 RCSB PDB: 8A29 PDBe: 8A29

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure