ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8a29F1 - ECOD Domain | ECOD

ECOD/Domains/e8a29F1

e8a29F1

UID: 003066838

PDB

Range: F:491-622
PDB: 8A29 chain F(all domains)

Molecule: 1-deoxy-D-xylulose-5-phosphate synthase

3D Structure

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Related Domains

Browse other domains in Transketolase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTK C-terminal domain-like(7522)

HH-groupTK C-terminal domain-like(7522.1)

TT-groupTK C-terminal domain-like(7522.1.1)

FFamilyTransketolase_C(7522.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Sodium ionNA
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF02780Transketolase_C

Transketolase, C-terminal domain

ClanCL0591TKC_like

External Links

ECOD PDB View: 8A29 RCSB PDB: 8A29 PDBe: 8A29

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.