ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8a4dF1 - ECOD Domain | ECOD

ECOD/Domains/e8a4dF1

e8a4dF1

UID: 003066892

PDB

Range: F:491-622
PDB: 8A4D chain F(all domains)

Molecule: 1-deoxy-D-xylulose-5-phosphate synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Transketolase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTK C-terminal domain-like(7522)

HH-groupTK C-terminal domain-like(7522.1)

TT-groupTK C-terminal domain-like(7522.1.1)

FFamilyTransketolase_C(7522.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02780Transketolase_C

Transketolase, C-terminal domain

ClanCL0591TKC_like

External Links

ECOD PDB View: 8A4D RCSB PDB: 8A4D PDBe: 8A4D

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure