ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8a7kA1 - ECOD Domain | ECOD

ECOD/Domains/e8a7kA1

e8a7kA1

UID: 003066977

PDB

Range: A:85-429
PDB: 8A7K chain A(all domains)

Molecule: Isoprenyl diphosphate synthase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

ISOPENTENYL PYROPHOSPHATEIPE
drugDrugBank DB04714
Zoledronic acidZOL
drugDrugBank DB00399

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 8A7K RCSB PDB: 8A7K PDBe: 8A7K

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ion

metal

MANGANESE (II) IONMN

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.