ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8bpjAAA1 - ECOD Domain | ECOD

ECOD/Domains/e8bpjAAA1

e8bpjAAA1

UID: 003070337

PDB

Range: AAA:1-129
PDB: 8BPJ chain AAA(all domains)

Molecule: Lysozyme

3D Structure

Loading viewer...

Related Domains

Browse other domains in Lys →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyLys(235.1.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
9,11-bis(4-fluorophenyl)-3,7-dimethyl-2,4,6,8-tetraoxa-9,11-diaza-1$l^{4},5$l^{4}-diruthenatricyclo[3.3.3.0^{1,5}]undecaneTZ6

+ 1 additive (Nitrate)

NitrateNO3

Pfam Families

C-type lysozyme/alpha-lactalbumin family

ClanCL0037Lysozyme

External Links

ECOD PDB View: 8BPJ RCSB PDB: 8BPJ PDBe: 8BPJ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.