ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cqlF2 - ECOD Domain | ECOD

ECOD/Domains/e8cqlF2

e8cqlF2

UID: 003073016

PDB

Range: F:155-204
PDB: 8CQL chain F(all domains)

Molecule: von Hippel-Lindau disease tumor suppressor

3D Structure

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Related Domains

Browse other domains in VHL_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSOCS box-like(4215)

HH-groupSOCS box-like(4215.1)

TT-groupSOCS box-like(4215.1.1)

FFamilyVHL_C(4215.1.1.2)

Ligands

in contact, ≤ 4 Å

(2~{S},4~{R})-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-~{N}-[(1~{S})-1-[5-fluoranyl-2-methoxy-4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-4-oxidanyl-pyrrolidine-2-carboxamideVH3
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

VHL box domain

ClanCL0642SOCS_box

External Links

ECOD PDB View: 8CQL RCSB PDB: 8CQL PDBe: 8CQL

Downloads

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