ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dsmA2 - ECOD Domain | ECOD

ECOD/Domains/e8dsmA2

e8dsmA2

UID: 003074253

PDB

Range: A:162-391
PDB: 8DSM chain A(all domains)

Molecule: Nicotinamide phosphoribosyltransferase

3D Structure

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Related Domains

Browse other domains in NAPRTase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNAPRTase(2002.1.1.128)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(3S)-N-[(1-benzothiophen-5-yl)methyl]-1-[6-(4-{2-[(2E)-3-(pyridin-3-yl)prop-2-enamido]ethyl}phenyl)thieno[2,3-d]pyrimidin-4-yl]piperidine-3-carboxamideTK0

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL

Pfam Families

PF04095NAPRTase

Nicotinate phosphoribosyltransferase (NAPRTase) family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8DSM RCSB PDB: 8DSM PDBe: 8DSM

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462within 5 Å only

Phosphate ionPO4

DrugBank DB14523within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.